Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., flagellar type III secretion system pore protein FliP from Rhodopseudomonas palustris CGA009

 Score =  215 bits (548), Expect = 7e-61
 Identities = 110/213 (51%), Positives = 154/213 (72%), Gaps = 3/213 (1%)

Query: 86  NSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVII 145
           NS G  + +I  Q++AL+T+L   P+++++MTSFTRIVVV+S+LR A+G    P N VII
Sbjct: 40  NSPGVTERAI--QLIALLTVLSIAPSILVMMTSFTRIVVVLSLLRTALGTATAPPNAVII 97

Query: 146 GIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFDLAQEPLKAFMLKQTRVNDLETF 205
            +ALFLT F+M P   +  ++ ++P +  +I    A   A  PL+ FM K  R  DL+ F
Sbjct: 98  ALALFLTAFVMGPTLQKSYDEGIKPLIANEIGVDDAMVRASGPLRIFMQKNVREKDLKLF 157

Query: 206 VEMSGAQVTA-PEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMAMGMM 264
           +++SG    A PE +S+ +L+PAF+ SELK AF+IGF+LFLPFLIIDLVVAS+LM+MGMM
Sbjct: 158 LDLSGEPPPATPEDLSLRILMPAFLISELKRAFEIGFLLFLPFLIIDLVVASILMSMGMM 217

Query: 265 MLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           ML P++VSLPFKL+ FVLVDGW+L+  +L  S+
Sbjct: 218 MLPPVVVSLPFKLIFFVLVDGWSLVAGSLVQSY 250