Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., flagellar biosynthetic protein FliP (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  320 bits (819), Expect = 3e-92
 Identities = 158/235 (67%), Positives = 203/235 (86%), Gaps = 3/235 (1%)

Query: 66  TIALGSSSGG--GGIPAFTMTTNSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIV 123
           T+   +S+G   G +PA T+ T +DGS +YS+ +QIL LMT L F+PAMVI++TSFTRI+
Sbjct: 12  TLLFVTSAGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRII 71

Query: 124 VVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFD 183
           VV+SILRQA+GLQQTPSNQV+IG++LF+TFFIMAPVF++I +Q V+PY++EQ+T +QAFD
Sbjct: 72  VVLSILRQAIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFD 131

Query: 184 LAQEPLKAFMLKQTRVNDLETFVEMSGAQ-VTAPEQVSMAVLIPAFITSELKTAFQIGFM 242
             +EPL+AFML Q R  DL+TF+++SG Q + +PE+  M+VL+PAFITSELKTAFQIGFM
Sbjct: 132 KGKEPLRAFMLGQVRTTDLKTFIDISGYQNINSPEEAPMSVLVPAFITSELKTAFQIGFM 191

Query: 243 LFLPFLIIDLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           LF+PFL++DLVVAS+LMAMGMMMLSPMIVSLPFK+MLFVLVDGW L++ TLA SF
Sbjct: 192 LFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVMGTLANSF 246