Pairwise Alignments

Query, 89 a.a., flagellar biosynthetic protein FliQ from Vibrio cholerae E7946 ATCC 55056

Subject, 84 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Pseudomonas fluorescens FW300-N2E2

 Score = 50.1 bits (118), Expect = 5e-12
 Identities = 26/70 (37%), Positives = 40/70 (57%)

Query: 12 ESLWLVLIMVCAIIIPSLLVGLVVAIFQAATSINEQTLSFLPRLIITLLALMFFGHWMTQ 71
          ++L+L+L+MV   II + +VGLVV + Q  T + EQTL F  +L+     L     W  +
Sbjct: 10 KTLYLILLMVAWPIIVATVVGLVVGLIQTVTQLQEQTLPFGFKLLAVAACLFLLSGWYGE 69

Query: 72 ILMDFFYSMI 81
           L+DF   +I
Sbjct: 70 TLLDFSREVI 79