Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., flagellar biosynthesis protein from Azospirillum brasilense Sp245

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 1/221 (0%)

Query: 16  FWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLSLQGFMIT 75
           F  + R+AA + ++   G   VP RVRL + + +  A+ P +P +P  +   +       
Sbjct: 16  FLVFARVAAAVSLLPGFGELAVPPRVRLCIAIPVALALTPTVPGLPDRLPPDAAVMLEQI 75

Query: 76  FEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLFMLLAT 135
           F + V G  +G+  +  +    + G I      L      D A  ++  +L    ++   
Sbjct: 76  FAETVAGAFLGLGAKLFLASLQVAGNIAAQAMGLANPFGTDAAGFESGSILSGTLVIAGL 135

Query: 136 LFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLSGIIAL 195
                 D H  MI  +V S+ S P  +     +     A  +G+ F+  + ++   ++  
Sbjct: 136 ALLFALDLHYLMIDALVRSYGSWPAATLPDPGMVAGRYAQLVGVTFRLGVQMAAPFLVFG 195

Query: 196 LTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCWYIVHG 236
           +  N++  ++ R  P + ++ +  + A++ G +L + +  G
Sbjct: 196 MIANMALALVNRVMPSMPVYFVA-TPAMVGGGMLVFLVTAG 235