Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., Flagellar biosynthesis protein FliR (NCBI) from Rhodospirillum rubrum S1H

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 12/232 (5%)

Query: 19  YTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMP----AIPAVPSDIALLSLQGFMI 74
           + R+   ++V+    + +V   +R+ L + +T   +P    A+P  P + A L L    +
Sbjct: 17  FVRLGTAMLVLPGLSSTYVSVNIRILLAVTITLVALPTVGAALPPAPDNTAFLVL----L 72

Query: 75  TFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLFMLLA 134
              +  IGV +GM+ QFL+      G I+G  + L  A   DP   Q + L+      +A
Sbjct: 73  IAVEATIGVFLGMMAQFLLVPVSFAGNIMGFSTGLMMAQAFDPTTAQQSALIAGFLGEVA 132

Query: 135 TLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLSGIIA 194
            +   V+  H  MI+ VV S+ + P G    T    + L   L   F+  L ++   II 
Sbjct: 133 MVMVFVTGMHHLMIEAVVNSYDAFPPGQMPDTGDMVQLLVTILSSGFRLGLQLAAPFIIY 192

Query: 195 LLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCW----YIVHGLYTHYD 242
            +  N + GV+ R  PQLN+  +     +L GL L      ++++    H++
Sbjct: 193 AIIFNATLGVIARLMPQLNVLFVAMPAQILFGLALLMTTVPFLIYSFLGHFE 244