Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., flagellar biosynthetic protein FliR from Dechlorosoma suillum PS

 Score =  144 bits (363), Expect = 2e-39
 Identities = 83/217 (38%), Positives = 131/217 (60%), Gaps = 1/217 (0%)

Query: 11  FIANYFWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLSLQ 70
           +IA + +P  RI A +    V     VP RVRL LGLAL+ A++PA+PA+P  I   S  
Sbjct: 12  WIAAFIFPLVRILAFVAAAPVFNNAAVPRRVRLILGLALSAAIIPAVPALPP-IEPASGI 70

Query: 71  GFMITFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLF 130
           G  I  +QI+IG+A+  V +F+     + G+++  Q  LGFA++ DP +   T ++ ++ 
Sbjct: 71  GLAILAQQILIGIALATVMRFVFAGIGLAGELMSFQMGLGFATLYDPQSTAQTGVVAEVV 130

Query: 131 MLLATLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLS 190
            L AT+ FL  +GHL MI  +V SF+S+PI + S++   +  LA     +F   L +SL 
Sbjct: 131 TLCATMVFLALNGHLLMIAGLVESFQSIPIATPSVSAGLWLNLAEAGAKVFSIGLLLSLP 190

Query: 191 GIIALLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGL 227
            +IAL+  NL+  ++++AAPQLN+ ++GF   L +GL
Sbjct: 191 VVIALMITNLALSILSKAAPQLNLMAVGFPITLTIGL 227