Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., flagellar biosynthetic protein FliR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 54/208 (25%), Positives = 100/208 (48%)

Query: 19  YTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALLSLQGFMITFEQ 78
           + R++ ++ ++   G   VP +V++ L L +  A+ P +    + +     +  ++   +
Sbjct: 18  FMRVSLVMFLLPFFGGDAVPMQVKVALCLVMAMALWPRLSLAGAVMPSHPFELVVMLASE 77

Query: 79  IVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLFMLLATLFF 138
           +V+G+ +GM   FL       GQ+LG Q      S+ DP +G    +      +++ L F
Sbjct: 78  LVLGLVLGMAVHFLFAGIQTGGQLLGFQMGFTMISIADPLSGAQISITSHFLYMVSLLTF 137

Query: 139 LVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLSGIIALLTV 198
           L  DGHL +++    SF  +P G          EL    G MF  ++ ++   ++ L  V
Sbjct: 138 LALDGHLFLLRAFAESFALVPAGGLVANPAVANELVRLAGGMFVIAVKIAAPVLVTLFLV 197

Query: 199 NLSFGVMTRAAPQLNIFSLGFSFALLVG 226
            L+  +M RAAPQ+N+  +GF   + VG
Sbjct: 198 ELALALMARAAPQMNLLMIGFPLKIAVG 225