Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., flagellar biosynthesis protein FlhB (RefSeq) from Shewanella amazonensis SB2B

 Score =  402 bits (1034), Expect = e-117
 Identities = 208/377 (55%), Positives = 268/377 (71%), Gaps = 1/377 (0%)

Query: 1   MAESD-GQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMV 59
           MAE+D  QERTEE T RRL+QA+EKGQVARSKEL + +VL+  AV  +  G  L K +  
Sbjct: 1   MAENDTSQERTEEPTGRRLEQAREKGQVARSKELGTAAVLLAAAVGFLMLGPSLGKAMHN 60

Query: 60  AMQRLFELSREEIFDLGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSAE 119
            M      SRE++FD   + +I       L LP+L ++  L   A  G   +GGI FS+ 
Sbjct: 61  VMTMTMVQSREQVFDTNSMLNIWIPIAKELGLPVLGLVLVLAALAFAGNIVLGGIIFSSN 120

Query: 120 AAMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSLDVY 179
             +PK SKM+PL+G KRMFG+Q+ +EL K + K  +V+  A++L+     ++ Q+S +  
Sbjct: 121 GVLPKASKMSPLAGFKRMFGLQALMELGKGLAKFSVVAVAAYFLLSFYFPEIIQISAEHL 180

Query: 180 PQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGKPE 239
           P N+FHALD+L    LL+  S+L++  ID+PFQIW H +QLKMTKQEVKDEYKDTEGKPE
Sbjct: 181 PSNVFHALDLLTWMFLLLCSSMLIIAVIDVPFQIWNHKKQLKMTKQEVKDEYKDTEGKPE 240

Query: 240 VKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHMAL 299
           VKGRIR +QRE A RRMMA +P+ADVI+ NPEHF+VAL+Y      AP V+AKGVD +A 
Sbjct: 241 VKGRIRQMQREIAMRRMMAEVPKADVIVVNPEHFAVALKYDAKRSPAPFVLAKGVDAVAF 300

Query: 300 KIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRRKGGQ 359
           KIREIAREYDIAIV APPLARA+YHTT+L QQ+P+GLF AVAQVLA+VFQL+QYR+  G+
Sbjct: 301 KIREIAREYDIAIVSAPPLARAIYHTTKLNQQVPEGLFTAVAQVLAYVFQLRQYRKGRGR 360

Query: 360 RPKLNEENMPIPPDMRY 376
           +P     N PIP + +Y
Sbjct: 361 KPTPIPLNQPIPDEFKY 377