Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., Flagellar biosynthetic protein FlhB (NCBI) from Rhodospirillum rubrum S1H

 Score =  241 bits (616), Expect = 2e-68
 Identities = 140/360 (38%), Positives = 221/360 (61%), Gaps = 8/360 (2%)

Query: 1   MAESDGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMVA 60
           MA+ D   +TE+ + R+L +A+E GQVA+S+E+ S  +L      +   G  +A  + + 
Sbjct: 1   MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALR 60

Query: 61  MQRLFELSREEIFDLGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSAEA 120
           ++   E       D   L D++   L+++ L L M ++   + A++G  G  G+ FSA+ 
Sbjct: 61  VRVFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKK 120

Query: 121 AMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGV--AFYLIEASQKDLFQLSLDV 178
             P+L K++PL+G KR+F +++ VE +K I+KV++VS +  A  L      +LF     +
Sbjct: 121 ITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMDQDIL 180

Query: 179 YPQNIFHALDILLNFVLLISCSLLV--VVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEG 236
                 H L +    VLLIS   +V  + A D  FQ ++H E+LKMTKQEVKDE+K+ EG
Sbjct: 181 VTLGQIHRLLV----VLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEG 236

Query: 237 KPEVKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDH 296
            P++K +IR L+   A+ RMMA +P+A V+ITNP HF+VAL+Y  +   APV++AKG D 
Sbjct: 237 DPQIKSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDF 296

Query: 297 MALKIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRRK 356
           +ALKIRE+A E ++ IV  PPLARAL+   E++ +IP   + AVA+V+ +V +LK+  ++
Sbjct: 297 IALKIREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR 356