Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., flagellar biosynthesis protein FlhB (RefSeq) from Shewanella loihica PV-4

 Score =  407 bits (1047), Expect = e-118
 Identities = 206/377 (54%), Positives = 279/377 (74%), Gaps = 1/377 (0%)

Query: 1   MAESD-GQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMV 59
           MA++D  QE+TEEATPRR +QA+EKGQVARSKEL + +VL+  AV     G  L + LM 
Sbjct: 1   MADNDTSQEKTEEATPRRREQAREKGQVARSKELGTSAVLMSAAVGFAVIGPSLGQSLMS 60

Query: 60  AMQRLFELSREEIFDLGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSAE 119
            M +LF +SR+EI+D   LF+I       L +P+   +  L   A +G   +GGI+FSA+
Sbjct: 61  VMTKLFTMSRQEIYDTNSLFNIWMMVFKELAIPMASFVLFLAFIAFLGNVVLGGITFSAK 120

Query: 120 AAMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSLDVY 179
           A MPK +KMNP+SG KRMFG+Q+ VEL K I K  +V+ +A+ L+     D+  LS    
Sbjct: 121 AFMPKGNKMNPISGFKRMFGVQALVELTKGIAKFSVVALMAYLLLSYYFNDILTLSQGHL 180

Query: 180 PQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGKPE 239
           P N+++ALD+L+   +++  S +++V ID+PFQIW H +QL+MTKQE+KDEYKDTEG+PE
Sbjct: 181 PGNVYNALDLLVWMFIVLCSSTVIIVVIDVPFQIWNHNKQLRMTKQEIKDEYKDTEGQPE 240

Query: 240 VKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHMAL 299
           VKGR+R +QRE AQRRMMA +P ADVI+ NPEH++VA++Y      AP V+AKGVD +A 
Sbjct: 241 VKGRVRQMQREMAQRRMMAEVPNADVIVVNPEHYAVAVKYDVTKAAAPYVLAKGVDDVAF 300

Query: 300 KIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRRKGGQ 359
           KIREIARE+D+AIV APPLARA+YHTT+++Q+IP+GLF AVAQVLA+VFQL+QY++KGG+
Sbjct: 301 KIREIAREHDVAIVSAPPLARAIYHTTKIDQEIPEGLFTAVAQVLAYVFQLRQYQQKGGK 360

Query: 360 RPKLNEENMPIPPDMRY 376
           RP     N PIP +++Y
Sbjct: 361 RPTPIPINQPIPDELKY 377