Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., flagellar biosynthetic protein FlhB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  187 bits (474), Expect = 5e-52
 Identities = 120/358 (33%), Positives = 192/358 (53%), Gaps = 6/358 (1%)

Query: 1   MAESDGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMVA 60
           MA+ D   RTE+AT +RL +A+ KG VA+S+E++       G V++ +   +L + +   
Sbjct: 1   MAQKD-PSRTEQATRKRLNKARNKGNVAKSQEVSKAVTTFAGLVAITFMLGVLNEHMQEV 59

Query: 61  MQRLFELSREEIFDLGK--LFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSA 118
            +  F LSR   F   +  ++ ++  S   L + LL I+  + +AA I      G  ++ 
Sbjct: 60  FR--FFLSRPHDFTPNEQTVYSLLLWSAGELAIMLLPIMLFIGLAAFIAMRLQVGKLWTT 117

Query: 119 EAAMPKLSKMNPLSGLKRMF-GMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSLD 177
           E      S+ N ++ LKRMF   Q+ + L KS+L+ + +      +++    +L  L   
Sbjct: 118 EVFKLDWSRFNVINALKRMFISPQTLIRLGKSLLQAVFIGIAPIIVLKQEMLNLLPLYFA 177

Query: 178 VYPQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGK 237
                  + L+     V      ++++ A+D+ +  W + E LKMTK EVKDE K  EG 
Sbjct: 178 DMSGIAVYMLETGARMVKYALVPMVIIAAVDLWYTRWDYNENLKMTKDEVKDERKQAEGD 237

Query: 238 PEVKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHM 297
           P VK + R    +   +RM+  +P ADV+ITNP H +VALRY      AP+V+A G DH+
Sbjct: 238 PVVKSQQRQKMMKVMAQRMLKEVPTADVVITNPTHIAVALRYDVTAAPAPIVVAMGADHL 297

Query: 298 ALKIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRR 355
           A +IRE+ARE+++ I    PLARALY + E+   IP  L+ AVA +LA + + +   R
Sbjct: 298 AKRIREVAREHNVPIRENKPLARALYKSVEVGDMIPAELYKAVAAILAGLAKFRPQAR 355