Pairwise Alignments

Query, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., flagellar biosynthesis protein FlhB (RefSeq) from Shewanella sp. ANA-3

 Score =  407 bits (1046), Expect = e-118
 Identities = 207/376 (55%), Positives = 272/376 (72%)

Query: 1   MAESDGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMVA 60
           MAE    ER+EE T RRL+QA+EKGQVARSKEL + +VL+  A  L   G  +AK L   
Sbjct: 1   MAEESSGERSEEPTGRRLEQAREKGQVARSKELGTATVLLSAATGLYMLGPGIAKALSNV 60

Query: 61  MQRLFELSREEIFDLGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISFSAEA 120
            +R+F + R  IFD  ++F++ G     +  PLL I+  + + A IG   +GG++FS +A
Sbjct: 61  FERVFTMERAAIFDTNQMFNVWGVVGSEIGWPLLKIMLLIVVVAFIGNVSLGGMNFSTQA 120

Query: 121 AMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSLDVYP 180
            MPK SKM+P++G KRMFG+Q+ VEL K I K  +V+  A+ L+     D+  LS D  P
Sbjct: 121 MMPKASKMSPIAGFKRMFGVQALVELTKGIAKFSVVAIAAYLLLSHYFNDILLLSADHLP 180

Query: 181 QNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGKPEV 240
            N+ HALD+L+   +L+  S+LV+V ID+PFQIW H +QLKMTKQEVKDEYKDTEGKPEV
Sbjct: 181 GNVHHALDLLVWMFILLCSSVLVIVVIDVPFQIWNHNKQLKMTKQEVKDEYKDTEGKPEV 240

Query: 241 KGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHMALK 300
           KGR+R +QRE AQRRMMA +P ADVI+ NPEH++VA++Y      AP VIAKGVD +A K
Sbjct: 241 KGRVRQMQRELAQRRMMAEVPNADVIVVNPEHYAVAIKYDVKRSAAPFVIAKGVDEVAFK 300

Query: 301 IREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRRKGGQR 360
           IRE+AR ++IAIV APPLARA+YHTT+LEQQIP+GLF AVAQVLA+VFQL+QY++  G++
Sbjct: 301 IREVARAHNIAIVSAPPLARAIYHTTKLEQQIPEGLFTAVAQVLAYVFQLRQYQKGRGRK 360

Query: 361 PKLNEENMPIPPDMRY 376
           P     N PIP D+++
Sbjct: 361 PIPIPVNQPIPDDLKH 376