Pairwise Alignments

Query, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  177 bits (449), Expect = 9e-50
 Identities = 92/173 (53%), Positives = 119/173 (68%), Gaps = 5/173 (2%)

Query: 14  DKDNLDDDFSLFRDEVKGVKKLRQDTILHAPNRNPKQK-EIRRTEREASDNDFYFSDEFM 72
           +K+N DD+ +LF    KG+K L+QD    A  + PK++ EI  T+  A   D YFSD + 
Sbjct: 2   NKEN-DDELALFSALTKGIKPLKQDKRHFAAPQKPKRELEIATTQLHA---DSYFSDTYQ 57

Query: 73  PHLTDEGPTRYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCLKEN 132
           P L  EG  R++R DV  +E+KRLRRG Y PD+ LD+HGM Q EAK EL A+I  C+K++
Sbjct: 58  PLLPLEGAMRWSRDDVDSHELKRLRRGDYQPDLLLDLHGMRQTEAKLELAALIQACVKQH 117

Query: 133 VHCACVQHGIGKHILKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLLSIPE 185
            HC CV HG G  ILKQN+P+WLAQHP V AFH+AP E+GGD ALLVL+ + E
Sbjct: 118 SHCCCVMHGHGTGILKQNLPMWLAQHPQVKAFHKAPKEWGGDAALLVLIDVGE 170