Pairwise Alignments

Query, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., Smr protein/MutS2 (RefSeq) from Shewanella loihica PV-4

 Score = 48.9 bits (115), Expect = 6e-11
 Identities = 47/181 (25%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 19  DDDFSLFRDEVKGVKKLRQDTI-------LHAPNRNPKQKEIRRTEREASDNDFYFSDEF 71
           +D+ +LF   + GVK L+           L A  +       RR   E    +       
Sbjct: 3   EDESALFLASMHGVKPLKASNAVTPIQSGLSAEGQQRHHDAQRRLALEKLSLELNDITPL 62

Query: 72  MPHLTDEGPTRYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCLKE 131
            PH          +  V     K  R+G Y     LD+ G++   A+  L   +      
Sbjct: 63  EPHAV----VSVKKQGVQGQVFKLFRQGKYDVQADLDVTGLSLARARELLFDFVINSQAS 118

Query: 132 NVHCACVQHGIGKHI------LKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLLSIPE 185
            +    V HG G +       LK  V  WLA+   V AFH AP  +GG GA++V+L   E
Sbjct: 119 GLRNLIVIHGTGVNSQPIPAKLKSYVAAWLAELEVVQAFHSAPAAWGGPGAMMVMLMKSE 178

Query: 186 K 186
           +
Sbjct: 179 Q 179