Pairwise Alignments

Query, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Smr family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 18/190 (9%)

Query: 4   NDHRITHNKSDKDNLDDDFSLFRDEVKGVKKLRQDTILHAPNRNPKQKEIRRTEREASDN 63
           +DH   H        DDD   F   ++G+  L        P   P +     + R+   +
Sbjct: 203 SDHGTQHPTRATSGDDDDDMSFATAMRGITPLSGKGREVPPAVTPGKAAT--SGRDPVQD 260

Query: 64  DFYFSDEFMPHLTDEGPTRYARSDV---SKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRE 120
                 EF    T+E    Y    V    +  + +LR G Y P+  LD+HG+   +A + 
Sbjct: 261 FLEGRIEFALEYTEE----YLEGHVVGLDELTIGKLRAGQYSPEAHLDLHGLNALQAYQS 316

Query: 121 LGAMIAYCLKENVHCACVQHGIGKH------ILKQNVPLWLAQHP---DVLAFHQAPLEF 171
           L         + +    V  G G++      IL++ +  WL + P    VLAF  A    
Sbjct: 317 LVGFFRGAYLKGLRTVLVIPGRGRNSPDGLGILREKLQSWLTRDPFKRVVLAFCTAQPTD 376

Query: 172 GGDGALLVLL 181
           GG GA+ VLL
Sbjct: 377 GGAGAVYVLL 386