Pairwise Alignments

Query, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., Smr protein/MutS2 (RefSeq) from Shewanella sp. ANA-3

 Score = 68.6 bits (166), Expect = 7e-17
 Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 20/184 (10%)

Query: 18  LDDDFSLFRDEVKGVKKLRQDTILHAPNRNPKQ-KEIRRTEREASDNDFYFSD-----EF 71
           LDD+ +LF +E+ GV  L+ D  + A N  PK   E +   R+A   + Y +        
Sbjct: 2   LDDESALFFEEMAGVVPLKGD--VKAVNLQPKALTEEQLQRRDALQREAYLACMPLDLSL 59

Query: 72  MPHLTDEGPTRYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCLKE 131
           +P +  +    + R  V     KRLR G Y   + LD+H     +A+    A++ Y L  
Sbjct: 60  IPIIAPDDIASFKREGVQGAVFKRLRLGQYSIKMELDVHAYRLSQAR---DALLNYLLAA 116

Query: 132 NVH---CACVQHGIGKH------ILKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLLS 182
             H   C  + HG G +      +LK  V  WL+Q   VLA+H    E GG GAL V+L+
Sbjct: 117 QAHGERCVMLIHGKGHNSKPVAGLLKSAVCHWLSQLDMVLAYHSTKTEQGGTGALYVMLT 176

Query: 183 IPEK 186
             E+
Sbjct: 177 KSEQ 180