Pairwise Alignments

Query, 310 a.a., 50S ribosomal protein L3 N(5)-glutamine methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., putative protoporphyrinogen oxidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  105 bits (263), Expect = 9e-28
 Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 12/212 (5%)

Query: 68  LTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFEP 127
           + S+ + R +E +I R+    P+ Y+   A FCG  F V   VL+PR    EL+    + 
Sbjct: 47  ILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVAPGVLIPRPETAELVDLIVKE 106

Query: 128 WLTEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFP 187
               +  R++D+ TGSGCIAI+     P+A+VDA DIS +AL +A +N ++  L+ QV  
Sbjct: 107 --NPDARRLLDIGTGSGCIAISLDKNLPDAKVDAWDISEEALAIARKNNEE--LDAQVTF 162

Query: 188 IRSDLFR--DLPQEQYDLIVTNPPYVDQEDMDSLPSE-FRHEPELGL-AAGSDGLKLARR 243
            R D+F    +    YD+IV+NPPYV + +   + +     EPEL L     D L+  RR
Sbjct: 163 RRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEANVLDWEPELALFVPDEDPLRFYRR 222

Query: 244 ILANAPLYLKENGILVCEV----GNSMVHMME 271
           I       L+  G L  E+    G  M+ M+E
Sbjct: 223 IAELGRELLRPGGKLYFEINQAYGQDMIRMIE 254