Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  145 bits (367), Expect = 4e-40
 Identities = 73/196 (37%), Positives = 125/196 (63%), Gaps = 1/196 (0%)

Query: 8   IIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAI 67
           + G    A+TGAL+AGR +MD FGV ++A+ TA+GGGT+RD ++G  P+ W+++P YL +
Sbjct: 9   LCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDPNYLIV 68

Query: 68  TCVAGVLTTWVYKWVIKLKGLFIRL-DALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTG 126
                  T    +   K+    + + DALGL +F++IG Q A+ +GL+    ++  ++TG
Sbjct: 69  ILATVGFTLVFIRRPRKVPQYTLPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITG 128

Query: 127 VFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVGYTLRM 186
           V GG++RD++CRQ P+VL  E+YA+ ++L    Y   L+ G++   +  ++++    LR+
Sbjct: 129 VGGGIIRDVLCRQIPMVLRTEIYATASILGGIAYTLSLQLGMNSQTALWLSMLSALILRL 188

Query: 187 AAVRFKWRLPSFHLET 202
           AA+R+   LP+F L+T
Sbjct: 189 AAIRWHLSLPAFDLKT 204



 Score = 35.0 bits (79), Expect = 1e-06
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 89  FIRLDALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRDLICRQPPLV-LHEE 147
           F   D  G  VF++ G   A R  + P    V A VT V GG +RD I    P+  L + 
Sbjct: 4   FYFFDLCGTAVFALTGALAAGRHRMDPFGVTVLAAVTAVGGGTIRDAIIGATPVFWLRDP 63

Query: 148 LYASIALLASGLYLALL 164
            Y  + L   G  L  +
Sbjct: 64  NYLIVILATVGFTLVFI 80



 Score = 32.3 bits (72), Expect = 6e-06
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 3   LSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNP 62
           L +   +G+    + GA  A    ++    +++   T +GGG +RD+L    P+  ++  
Sbjct: 91  LPIADALGLALFTVIGAQKALSLGLNGMSAVIMGLITGVGGGIIRDVLCRQIPM-VLRTE 149

Query: 63  EYLAITCVAGVLTTWVYK---------WVIKLKGLFIRLDAL 95
            Y   + + G+  T   +         W+  L  L +RL A+
Sbjct: 150 IYATASILGGIAYTLSLQLGMNSQTALWLSMLSALILRLAAI 191