Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (378), Expect = 2e-41
 Identities = 71/195 (36%), Positives = 126/195 (64%), Gaps = 1/195 (0%)

Query: 8   IIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAI 67
           + G    A++GAL+AGR +MD FGV+++AS TAIGGG++RD LLG  P+ W+++P Y+ +
Sbjct: 10  LCGTAVFALSGALAAGRHRMDPFGVIVLASVTAIGGGSIRDALLGTTPVFWIRDPNYIIV 69

Query: 68  TCVAGVLTTWVYKWVIKLKGLFIRL-DALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTG 126
                +L     +   K+    + + DA GL +F++IG + A+ +GL   I +V  ++TG
Sbjct: 70  ILATVLLALLFIRKPKKVPQYTLPVADAFGLALFTVIGAEKALNLGLSGMIAVVMGLITG 129

Query: 127 VFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVGYTLRM 186
           V GG++RD++CRQ P++L  E+YA+ ++     Y   + +G++D V+  + ++    +R+
Sbjct: 130 VGGGIIRDILCRQIPMILRTEIYATASIFGGISYTCAITWGLADKVALAIAMISALVIRL 189

Query: 187 AAVRFKWRLPSFHLE 201
           AA+++  RLP+F L+
Sbjct: 190 AAIKWHLRLPAFELK 204



 Score = 33.1 bits (74), Expect = 4e-06
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 93  DALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRDLICRQPPLVLHEELYASI 152
           D  G  VF++ G   A R  + P   +V A VT + GG +RD +    P+    +    I
Sbjct: 9   DLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAIGGGSIRDALLGTTPVFWIRDPNYII 68

Query: 153 ALLASGLYLALL 164
            +LA+ L LALL
Sbjct: 69  VILATVL-LALL 79



 Score = 29.6 bits (65), Expect = 4e-05
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 3   LSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNP 62
           L V    G+    + GA  A    +     +++   T +GGG +RDIL    P+  ++  
Sbjct: 92  LPVADAFGLALFTVIGAEKALNLGLSGMIAVVMGLITGVGGGIIRDILCRQIPM-ILRTE 150

Query: 63  EYLAITCVAGVLTTWVYKW---------VIKLKGLFIRLDAL 95
            Y   +   G+  T    W         +  +  L IRL A+
Sbjct: 151 IYATASIFGGISYTCAITWGLADKVALAIAMISALVIRLAAI 192