Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., glycine transporter (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  106 bits (265), Expect = 3e-28
 Identities = 66/195 (33%), Positives = 102/195 (52%)

Query: 2   LLSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKN 61
           +L  L I G  A A+ GAL A R ++D  GV+++A+ T +GGG VRD++L + P     N
Sbjct: 4   MLYALDIFGTFAFAVAGALKAARHELDALGVLVLATVTGVGGGMVRDMMLAYGPPAVFHN 63

Query: 62  PEYLAITCVAGVLTTWVYKWVIKLKGLFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVS 121
             YL +    G+L  +  + V   + L    DA+GL VF+ IG   AM  GL     +  
Sbjct: 64  DAYLLVCLAGGLLVFFFARGVAARRNLVRYADAVGLGVFTAIGGAKAMAFGLGGLPVVFL 123

Query: 122 AVVTGVFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVG 181
           AV+T   GG++RD++  + P VL  + YA+ ++L +   L L   G   +     +  V 
Sbjct: 124 AVLTATGGGVIRDVLVGEVPAVLRTDFYATASILGAVALLGLAALGRPPLEQLAGSAAVT 183

Query: 182 YTLRMAAVRFKWRLP 196
             LR+ A+  + RLP
Sbjct: 184 TGLRLMAIWLRMRLP 198



 Score = 46.2 bits (108), Expect = 4e-10
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 85  LKGLFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRD-LICRQPPLV 143
           ++ +   LD  G   F++ G   A R  L     LV A VTGV GG++RD ++   PP V
Sbjct: 1   MQDMLYALDIFGTFAFAVAGALKAARHELDALGVLVLATVTGVGGGMVRDMMLAYGPPAV 60

Query: 144 LHEELYASIALLASGLYLALLEFGVS 169
            H + Y  +  LA GL +     GV+
Sbjct: 61  FHNDAYL-LVCLAGGLLVFFFARGVA 85