Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  115 bits (287), Expect = 7e-31
 Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 1/190 (0%)

Query: 8   IIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAI 67
           + G    A+ GALSA    +D  GVM++A   A+GGG +RD+L+G  P   +++  Y A+
Sbjct: 14  LAGTVVFALEGALSAIHGGLDLLGVMVIAFVAALGGGVIRDLLIGDSPPNAIRDWRYPAL 73

Query: 68  TCVAGVLTTWVYKWVIKLK-GLFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTG 126
           T + G+LT   +    +    L   LDA GL +F++ G + A+  G+ P I ++   VTG
Sbjct: 74  TFITGLLTFIFHSTAQQFPVALVTVLDAAGLALFAVAGVEKALLFGIRPFIAMLMGTVTG 133

Query: 127 VFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVGYTLRM 186
           V GG++RD++  + PLVLH ++YA+ A   + + +     G+    + +      + LR+
Sbjct: 134 VGGGVIRDVLLARVPLVLHADIYATAAFAGAFIVVVARRAGLPPGAAALAGGSACFVLRV 193

Query: 187 AAVRFKWRLP 196
            AV + W LP
Sbjct: 194 LAVTYGWHLP 203



 Score = 35.0 bits (79), Expect = 1e-06
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 83  IKLKGLFIRLDALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRD-LICRQPP 141
           + ++ L +  D  G +VF++ G   A+  GL     +V A V  + GG++RD LI   PP
Sbjct: 3   LNVETLVLAADLAGTVVFALEGALSAIHGGLDLLGVMVIAFVAALGGGVIRDLLIGDSPP 62

Query: 142 LVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVGYTLRMAAV 189
             + +  Y ++  + +GL   +           +VT++    L + AV
Sbjct: 63  NAIRDWRYPALTFI-TGLLTFIFHSTAQQFPVALVTVLDAAGLALFAV 109