Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  144 bits (363), Expect = 1e-39
 Identities = 70/197 (35%), Positives = 125/197 (63%), Gaps = 1/197 (0%)

Query: 8   IIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEYLAI 67
           + G    A++GAL+AGR +MD FGV+++AS TA+GGG++RD L+G  P+ W+++P Y+ +
Sbjct: 10  LCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYIIV 69

Query: 68  TCVAGVLTTWVYKWVIKLKGLFIRL-DALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTG 126
                +    + +   K+    + + DALGL +F++IG + A+ MGL   I +V  ++TG
Sbjct: 70  ILATVLACLLLVRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITG 129

Query: 127 VFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLVVGYTLRM 186
           V GG++RDL+CRQ P+VL  E+YA+ +++    Y   L +G+ +  +  + +     +R+
Sbjct: 130 VGGGIIRDLLCRQIPMVLRTEIYATASIVGGIGYTVSLAYGMGEKTALFLAMTSALIIRL 189

Query: 187 AAVRFKWRLPSFHLETE 203
            A+++   LP+F L+T+
Sbjct: 190 CAIKWHLSLPAFDLKTK 206



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 24/72 (33%), Positives = 34/72 (47%)

Query: 93  DALGLIVFSIIGTQVAMRMGLHPGICLVSAVVTGVFGGLLRDLICRQPPLVLHEELYASI 152
           D  G  VF++ G   A R  + P   +V A VT V GG +RD +    P+    +    I
Sbjct: 9   DLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYII 68

Query: 153 ALLASGLYLALL 164
            +LA+ L   LL
Sbjct: 69  VILATVLACLLL 80



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 3   LSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNP 62
           L V   +G+    + GA  A    +     +++   T +GGG +RD+L    P+  V   
Sbjct: 92  LPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITGVGGGIIRDLLCRQIPM--VLRT 149

Query: 63  EYLAITCVAG 72
           E  A   + G
Sbjct: 150 EIYATASIVG 159