Pairwise Alignments
Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056
Subject, 232 a.a., tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC-like protein from Phaeobacter inhibens DSM 17395
Score = 176 bits (446), Expect = 1e-48
Identities = 106/238 (44%), Positives = 140/238 (58%), Gaps = 14/238 (5%)
Query: 10 AQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHN--DDQRRFVIAETG 67
A+L W D PVSDQFDD YFS +GLAET +VFL N L R+ + + F IAE G
Sbjct: 6 ARLSWRDGSIPVSDQFDDPYFSIHDGLAETGHVFLGGNDLAARFASAAETGADFHIAELG 65
Query: 68 FGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQK 127
FGTGLN LA W+A+ +E A LHF SFE +P++ D+ +A +A+PE+A +A++
Sbjct: 66 FGTGLNLLAAWRAWETAQEGC--AAPSVLHFTSFEAFPMAVEDMARALEAFPEVAHWAER 123
Query: 128 LHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNP 187
+ A C L ++T GD + LP+ G DAWFLDGF+P+KNP
Sbjct: 124 FLAVWDGA-GACDLGNLRVNVIT-----GDARMSLPEWT----GAADAWFLDGFSPAKNP 173
Query: 188 EMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSL 245
E+W +L A +A G T AT+T+AGFVRRGL AGF + + GFG KR M L
Sbjct: 174 ELWQDDLLAAVAGHTGAGGTAATYTAAGFVRRGLEAAGFEVSRTPGFGRKRHMTKARL 231