Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 5e-18
 Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 18/235 (7%)

Query: 9   HAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGF 68
           H Q+  + + T +S  FDD Y ++   ++E+ +V+++         +    R  I E GF
Sbjct: 26  HVQMTKDGSHTLMSSLFDDSYHAHNGAISESEHVYIQSGLADL---DPSFERVNILELGF 82

Query: 69  GTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAW---PELAQFA 125
           G+G+N +   +  +   +  P    + + F++ E YP+    + Q +      P L +  
Sbjct: 83  GSGMNAMLTLKRVLG-SDGKPGKLKRPIRFVTVEAYPVPSEVIAQLNYKEHLPPALQELF 141

Query: 126 QKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSK 185
            +LH     + P  + + L  G V   +        LP      +  ++  F DGFAPSK
Sbjct: 142 DRLH-----SAPWGEDVTLFPGFVLHKIHATWDSLALP------ENSINLVFYDGFAPSK 190

Query: 186 NPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREM 240
            PE+W Q+ F  +  +   G    ++ + G  +R L  AGF +K   G   +REM
Sbjct: 191 QPELWTQDNFDRLFPMMMPGGMLVSYCANGQFKRNLKAAGFKVKPHPGALGRREM 245