Pairwise Alignments

Query, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., protein YfcK from Marinobacter adhaerens HP15

 Score =  347 bits (889), Expect = 1e-99
 Identities = 240/673 (35%), Positives = 345/673 (51%), Gaps = 76/673 (11%)

Query: 7   ISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHN-DDQRRFVIAE 65
           I  A+L W+D G P S +F DVYFS  NGL ETRYVFL+ N LP+R+    +   FVIAE
Sbjct: 10  IEPAELAWHD-GVPESIRFGDVYFSRDNGLEETRYVFLQHNQLPERFAQIPEGGNFVIAE 68

Query: 66  TGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFA 125
            GFGTGLNFLA WQA+    + +  A    LHF+S E++PL+  DL +A   WPELA  A
Sbjct: 69  NGFGTGLNFLAAWQAW----QRHAPAHAATLHFVSVERFPLTHEDLARALAQWPELAALA 124

Query: 126 QKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSK 185
            +L  +YP  +    R++L  G V L L+FGDI D    +  Q     DAWFLDGFAPS+
Sbjct: 125 DELLLNYPPLVRGVHRLLLAGGQVRLTLFFGDITDAWQSLDFQ----ADAWFLDGFAPSR 180

Query: 186 NPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSL 245
           NP+MW +N    +   +K G T ATFTS G +RR L++AGF M+K  G+G KR+M+ G L
Sbjct: 181 NPDMWLENTINKIRAHSKPGTTLATFTSVGRIRRALMEAGFRMEKTTGYGRKRDMLKGVL 240

Query: 246 SEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQGA 305
             + P    AP  +   T   + + IIG G+A   LA  LA RG  VTL  A   P   A
Sbjct: 241 VAENP----AP-IKTVPTEQQESILIIGAGVAGCALARNLADRGYPVTLIDA-HGPGAAA 294

Query: 306 SGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDW-------CGVTQL 358
           SGN QGA+Y  L  + N  + +   A  FA++          F H+W        G+ QL
Sbjct: 295 SGNAQGALYVKLGVEFNDQTELALTALTFAQR----------FYHNWRDQHWHPTGLLQL 344

Query: 359 MWDEKATDKLKSMLEGN-FPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQ 417
             + +  D+ +  L+ N +P  + + ++ EQ +   GVP +   + +P  GWL PA L +
Sbjct: 345 AHNPQEADRQRRFLQRNDYPRSIFYPVTREQASALTGVPTESGGLWFPGSGWLEPANLCK 404

Query: 418 GLIHLLEQQGKLTAHYQTPIDAL-----TWQPETQLWQLRSGDTLMSHQCVVIASGHQFD 472
            L +       ++  + + ++ L     TW   T+       +  ++   VVI SGH   
Sbjct: 405 ELAN----HPLISTLFHSEVNNLRRSDGTWSISTE------NNRSITADRVVICSGHLSP 454

Query: 473 SLSQT-AELPLGKVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQH 531
            L  T     L  ++GQVSH+P T  L    +V+C + Y+ P   +  +   GA++D + 
Sbjct: 455 ELIPTKGRFRLKAIRGQVSHLPAT-ALRSPTAVVCGNRYLNPALGE--FAVTGATFDLRD 511

Query: 532 LDATFDPQAQHENAQKLIHCLPEQTWPLEVDVSGNQ--SRQGVRCVSRDHLPFVGNV--G 587
            + +   ++ +EN  +L   LP         +SG +   R   RC + D+ P  G V  G
Sbjct: 512 NNPSPTVESHNENIDELGSMLPAVFSDESDALSGQELSGRVAFRCTTHDYQPVAGPVFDG 571

Query: 588 EFSKITEQYRDLAQQHQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLG 647
           E   +                     LY L GLGS+GL+ APL+AE LA  + G P  L 
Sbjct: 572 ESGDL-------------------DSLYLLTGLGSKGLTYAPLLAEYLADLLTGQPPCLP 612

Query: 648 VDLLEQLHPSRMW 660
            +L ++L   R++
Sbjct: 613 ANLAKRLETRRLY 625