Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator YnfL from Pseudomonas fluorescens FW300-N2E2

 Score =  104 bits (259), Expect = 3e-27
 Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 14/267 (5%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           M++R LRYF+ +  +  F +A+  L ++QP +S+ I+ LEQE+   L  R  RR  L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAALALGISQPPLSQQIQALEQEIGARLFERTNRRVELSEA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQL-HRGHLRLGI---PPMVGHVYARLFRQYRQTY 116
           G +  + A+++L Q+ +  A++    QL   G L++G     P    +   +F  +RQ +
Sbjct: 61  GRLFLEEARRVLVQVDKA-ADVARRAQLGELGELKIGFTSSAPFNSTIPQAIF-SFRQRF 118

Query: 117 PNVELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPD-LNTVALDHYPIFAVV-PDIPL 174
           P V L + E    ++  A++D  I+V +  + P   PD L  + L   P+ AV+    PL
Sbjct: 119 PAVHLNLREMSSTQVADALVDEVIEVGI--MRPLPLPDALREIELSREPLVAVLSAKHPL 176

Query: 175 WR-SLTTLTWAQISQEPFYLFTHEF--TLSDHIHTCCQAAGYTPQVAARSSQWDFLVALV 231
            + +   L  + ++QEPF  F   +   L   +    + AG++P  A  + +   ++ LV
Sbjct: 177 AQGNEEGLFLSALAQEPFVFFPRSYGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLV 236

Query: 232 KSGVGVCFLPAPLCQRIQGDGVLIYPI 258
            +G+GV  LPA   QR++ DGV+  P+
Sbjct: 237 AAGLGVSVLPASY-QRMRIDGVVYRPL 262