Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  112 bits (279), Expect = 1e-29
 Identities = 92/297 (30%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           MD+  L  F+ +    SF+ A ERL +TQP ISK I  LEQ+L+  L  R GR   LTEA
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVG-HVYARLFRQYRQTYPNV 119
           G  +  RA QIL  +      LT+L     G L L     +G H    L R++ + YP V
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLLREFTRRYPQV 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPI-FAVVPDIPLWRSL 178
            L +         + IL G  ++AV  L+P  H  +    +   P+ F V P+  L  + 
Sbjct: 121 ALDIQFLDSEVAYEEILHGRAELAVITLAPEPHTLVRATPVWDDPLDFVVAPEHALLEN- 179

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHI-HTCCQAAGYTPQVAARSSQWDFLVALVKSGVGV 237
           + ++ A I+  P  +F    T + HI     +A G TP +A  ++  + +  +V  G+  
Sbjct: 180 SAVSLADIALHP-AVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAW 238

Query: 238 CFLPAPLCQ----RIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCRRQ 290
             LP  +      RI   G+        +  +LG + H ER +S  A A++AL   Q
Sbjct: 239 SVLPRTMLDEQVARIPLPGI-------QLSRQLGYILHTERTLSNAARAFMALLDAQ 288