Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  113 bits (283), Expect = 4e-30
 Identities = 93/299 (31%), Positives = 138/299 (46%), Gaps = 16/299 (5%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 60
           MD+  L  F+ +    SF+ A ERL++TQP ISK I  LEQ+L   L  R GR   LTEA
Sbjct: 1   MDLANLNAFIAIAETGSFSGAGERLYLTQPAISKRIAGLEQQLNVRLFDRLGREVSLTEA 60

Query: 61  GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVG-HVYARLFRQYRQTYPNV 119
           G  +  RA QIL  +      LT+L     G L L     +G H    + R + +TYP V
Sbjct: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPILRAFTRTYPKV 120

Query: 120 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPI-FAVVPDIPLWRSL 178
            L +         + IL G  ++AV  L+P  H  +  V +   P+ F   P+ PL  S 
Sbjct: 121 ALDIQFLDSEIAYEEILHGRAELAVITLAPEPHALIRAVPVWDDPLDFVAAPEHPLANS- 179

Query: 179 TTLTWAQISQEPFYLFTHEFTLSDHIHT-CCQAAGYTPQVAARSSQWDFLVALVKSGVGV 237
             +    I + P  +F    T + HI +  C+A G  P +A  ++  + +  +V  G+  
Sbjct: 180 GPMKLEDIVRYP-AVFPGGNTFTHHIVSGLCEAQGLKPNIAMSTNYMETIKMMVSIGLAW 238

Query: 238 CFLPAPLCQ----RIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCRRQNR 292
             LP  +      RI   GV        ++ +LG + H ER +S  A A++ L   Q +
Sbjct: 239 SVLPRTMLDEQVARIPLPGV-------QLNRQLGYILHTERTLSNAARAFMKLLDAQTQ 290