Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (505), Expect = 8e-56
 Identities = 98/286 (34%), Positives = 164/286 (57%)

Query: 3   IRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGE 62
           I+ L  FV L    SFT+A+E+L +TQPT+SKM++ LE   +Q L+ R  ++  LT+AGE
Sbjct: 5   IKNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSLTQAGE 64

Query: 63  IVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYPNVELT 122
           ++ + A+++L Q   L+ +L++L  + RG+LRLG+ PM+  +   L   +R  YP V L 
Sbjct: 65  LLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVIELLTAFRARYPGVRLE 124

Query: 123 VVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSLTTLT 182
           + EYGG   E+A+L  ++D+A T L      +L    L  YP+ A +P      +   L 
Sbjct: 125 MFEYGGFGCEKALLANNLDIAFTALPATHADELTAQPLTAYPLLACLPAGHKLANKAALD 184

Query: 183 WAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVCFLPA 242
           W      PF ++  +F L+  + +  + AG    VA RS QWDFL ++V++ +G+  LPA
Sbjct: 185 WCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMVEANMGLAILPA 244

Query: 243 PLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCR 288
           P+C+++    +   P++    W L ++W    +++  A A++AL R
Sbjct: 245 PICEKLTDKALCFRPLSGGHTWDLALIWRSHLHLTPAAAAFLALSR 290