Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  219 bits (557), Expect = 8e-62
 Identities = 109/284 (38%), Positives = 168/284 (59%)

Query: 3   IRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGE 62
           I+ L YF+ LV   +FT+A+E+ F+TQPT+SK+I+ LE+ L Q LLHR  ++  LT+AG 
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGI 64

Query: 63  IVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYPNVELT 122
           ++   A++IL Q  +L  +LT+L+ L  GHLRLG+ PM+  +   L   +RQ YP +EL 
Sbjct: 65  LLENSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSSLIIDLLTAFRQQYPGIELQ 124

Query: 123 VVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSLTTLT 182
           + EYGG   EQA+L+  +D+A T L      +L   AL  YP+ A +P          +T
Sbjct: 125 MYEYGGFGCEQALLNNSLDIAFTALPTTHDIELANRALTRYPLLACLPKDHALAQQEAVT 184

Query: 183 WAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVCFLPA 242
           W      PF L+  +F+L+  I      AG    +A RS QWDFL  +V++ +GV  LP 
Sbjct: 185 WQDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGVAILPE 244

Query: 243 PLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIAL 286
           P+C ++QG  ++  PI P + W L ++W ++  ++  A+A + L
Sbjct: 245 PICHKLQGSELVFKPIRPNLTWDLALIWRKDLPLTPAAQALLDL 288