Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (256), Expect = 6e-27
 Identities = 79/296 (26%), Positives = 150/296 (50%), Gaps = 19/296 (6%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHR-------EGR 53
           MDI+ LR F  L  + SFT A+++L + QP +S+ I+ LE+ L   L++R       +G 
Sbjct: 1   MDIKQLRQFEALATKGSFTLAAKQLNLAQPALSQGIKRLEESLGVTLVNRNKHYRGQDGS 60

Query: 54  RFWLTEAGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVY--ARLFRQ 111
           R  LT  GE + Q A+ IL Q++Q +A +  +  L +G +R+ +P M+G  Y  +RL   
Sbjct: 61  RLTLTAEGEALAQHARLILKQVKQAEAHIKSMANLTKGEVRIAVPGMLGSYYLPSRLM-A 119

Query: 112 YRQTYPNVELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNT-VALDHYPIFAVVP 170
           +R  YP+++L++ E G R   + + + ++D+A+ +   +  P+ ++ + L    + AV  
Sbjct: 120 FRHRYPDLKLSLFEGGTRDSLRMLQNEEVDIAI-ITGQDLQPNFDSHLLLREQMVVAVGE 178

Query: 171 DIPLWRSLTTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVAL 230
           D PL      +T  Q  ++   +F   +   + + +  +A      +A  ++    L+ L
Sbjct: 179 DHPL-AEHKEITLEQFFEQELVMFKPGYFHREWMLSQAKALDLEVNIAFETN----LINL 233

Query: 231 VKSGVGVCFLPAPLCQRI--QGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWI 284
           +K  V   F    + + +    D +   P +PA+   L + W+RER +     A++
Sbjct: 234 IKQVVAQGFAITSVLEMVIEARDPIRAIPFSPAVHLDLHIAWNRERPIGLADRAFV 289