Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (403), Expect = 5e-44
 Identities = 97/293 (33%), Positives = 165/293 (56%), Gaps = 8/293 (2%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHR--EGRRFWLT 58
           MD++AL YFVE+V    F +A+ER+ ++QP +SK I  LE EL  PLL R   G +  LT
Sbjct: 1   MDLKALHYFVEIVASGGFNRAAERIHISQPALSKSIAQLETELALPLLTRGKRGTKVQLT 60

Query: 59  EAGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPM-VGHVYARLFRQYRQTYP 117
             GE+VY+ A ++L   Q +  EL  L  L+RG L+LG+ P+    ++A +  +YRQ YP
Sbjct: 61  PHGEVVYRHALRLLEDKQTMMEELAQLKGLNRGILKLGLAPLGSAELFAPIIAKYRQAYP 120

Query: 118 NVELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVP-DIPLWR 176
            +E  ++  GG +  QA+  G+I++A  ++          +A+   P+  V+P + PL R
Sbjct: 121 EIETQLLVRGGVEQTQALQQGEIELATGIIDLKDR--YEGIAIHTEPMVVVLPSEHPLAR 178

Query: 177 SLTTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVG 236
             + +   ++  +   LF  EF+L + +   C  AG + +   + +Q +F VALV +G+G
Sbjct: 179 R-SEIPLGELDGQAQILFESEFSLHEMVINACLHAGVSIKNPTQVNQPEFGVALVAAGIG 237

Query: 237 VCFLPAPLCQRIQGDGVLIYPITPA-IDWRLGVVWHRERYVSKTAEAWIALCR 288
           +  LP  + +R + D V+  P+T   + W++ + W ++  +S  A+A I L +
Sbjct: 238 LMLLPKFIAERYRPDAVITRPLTQTDLSWQMSLFWRKDLSLSFAAQAMIDLVK 290