Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  206 bits (525), Expect = 4e-58
 Identities = 100/288 (34%), Positives = 172/288 (59%)

Query: 3   IRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGE 62
           I+ L+ F+ LV  ++FT+A+++ F+TQPT+SK+I+ LE+ L + LL R  ++  LT+AG+
Sbjct: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64

Query: 63  IVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYPNVELT 122
           +    A++IL Q  +L  ++++L+ L  G LRLG+ PM+  +   L   YR+ YP VEL 
Sbjct: 65  LFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLIIGLLTSYRKRYPGVELQ 124

Query: 123 VVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPLWRSLTTLT 182
           + EYGG   EQA+L+  +D+A T L      +L    L  YP+ A +P+     + + L+
Sbjct: 125 MYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYLS 184

Query: 183 WAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVCFLPA 242
           W      PF L+  +F+L+  I+   + AG    +A RS QWDFL  +V++ +G+  LP 
Sbjct: 185 WQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGLAILPE 244

Query: 243 PLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCRRQ 290
           P+CQ++    ++  P+ PA+ W L ++W +   ++  A A + L +++
Sbjct: 245 PICQKLSNSKLVFRPMQPALTWDLALIWRQNLPLTPAANALLELSKQK 292