Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 99.8 bits (247), Expect = 7e-26
 Identities = 73/291 (25%), Positives = 140/291 (48%), Gaps = 12/291 (4%)

Query: 1   MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHR----EGRRFW 56
           MDIR L++   L N  SFT A+++L + QP +S+ I+ LEQ L   L++R      +   
Sbjct: 1   MDIRQLKHLDALANTGSFTAAAKKLNMAQPALSQSIKRLEQSLGVTLINRTSNKNDKHLA 60

Query: 57  LTEAGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVY--ARLFRQYRQ 114
           LT  G +++Q A  IL Q++Q +A++  +  L  G +R+ +P M+G  Y  +RL   +R 
Sbjct: 61  LTAEGLVLHQHATLILKQIKQAEAQIRAMANLTSGEVRIAVPGMLGSFYLPSRLM-AFRH 119

Query: 115 TYPNVELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVPDIPL 174
            YP ++L++ E G R   + +   ++D+A+      Q    + + +    + A+  + PL
Sbjct: 120 QYPELKLSLFEGGTRDALRMLQQEEVDIAIITAQDLQSDFDSQLLIREQMVIAMGAEHPL 179

Query: 175 WRSLTTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSG 234
                 ++          +F   +   + I +  +  G  P +A  ++  + +  +V  G
Sbjct: 180 -ADHPAVSLNDFFDHELVMFKTGYFHREWILSQAKELGKKPNIAFETNLINLIKQIVSQG 238

Query: 235 VGV-CFLPAPLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWI 284
            G+   L   +  +   D +L  P  P +   L + W ++R VS+   A++
Sbjct: 239 FGITSVLEMAISPK---DDILAKPFDPPVFLNLHIAWKKQRPVSQADRAFV 286