Pairwise Alignments

Query, 229 a.a., LrgB family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  204 bits (520), Expect = 9e-58
 Identities = 101/223 (45%), Positives = 155/223 (69%)

Query: 6   LSLFCFLLTLLFYYASKFLYRRKRSLLLMPLLLAPLLLVIVVMMFHIPYQAYMADAHWLL 65
           L+L   LLTL  Y+A+K LY+R R   L P++LAP+++ ++V    IP   Y    HWL+
Sbjct: 21  LALISLLLTLFCYFAAKILYQRHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLM 80

Query: 66  WLLGPATVAFAVPVYDNRALLRQHWLSLSVGVVVSVLVAISSTVLLARWLNLPDLLQRSL 125
            +L PAT+AFA+P+Y  R L+RQ+ L+++ GV+  +L+ + S+ LL +++ LP  L +SL
Sbjct: 81  AMLAPATIAFALPIYRERKLIRQYPLTIAFGVIAGLLLGMVSSWLLVKFVPLPVELSKSL 140

Query: 126 AMRSITTPFAVEATKSIGGQSDLTALFVVLTGVIGMAVGEIILTVLSIRSRLGKGASLGA 185
            +RS++TPFA+EAT + GG  +LTA+ V++TG+IGM V E +  ++ IR+ LGKG +LGA
Sbjct: 141 LVRSVSTPFAMEATGAFGGVPELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVALGA 200

Query: 186 SAHGAGTAKAYQIGNSEGVVSSVVMMLAGMVTVVIAPWIGRWF 228
           SAHGAG AKA ++G  EGV++S+ M+  G+  V+ AP+    F
Sbjct: 201 SAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPFFALIF 243