Pairwise Alignments

Query, 229 a.a., LrgB family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  129 bits (325), Expect = 4e-35
 Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 2/218 (0%)

Query: 11  FLLTLLF--YYASKFLYRRKRSLLLMPLLLAPLLLVIVVMMFHIPYQAYMADAHWLLWLL 68
           FLL + F  ++ +K L ++   +LL P+LL   +L+I + M +I Y+ Y    H + + L
Sbjct: 9   FLLAVTFGVFFFAKLLQKKTGLVLLNPILLTIAVLIIFLKMANISYETYNQGGHLIEFWL 68

Query: 69  GPATVAFAVPVYDNRALLRQHWLSLSVGVVVSVLVAISSTVLLARWLNLPDLLQRSLAMR 128
            PA VA  VP+Y    ++++  L + +  +   +V + S VL+A+++     +  SLA +
Sbjct: 69  RPAVVALGVPLYLQLEMIKKQLLPILLSQLAGCIVGVISVVLIAKFMGASQEVILSLAPK 128

Query: 129 SITTPFAVEATKSIGGQSDLTALFVVLTGVIGMAVGEIILTVLSIRSRLGKGASLGASAH 188
           S+TTP A+E TK+IGG   LTA  VV  G++G   G   + ++ + S + +G S+G +AH
Sbjct: 129 SVTTPIAMEVTKAIGGIPSLTAAVVVAVGLLGAICGFKTMKIMHVGSPIAQGLSMGTAAH 188

Query: 189 GAGTAKAYQIGNSEGVVSSVVMMLAGMVTVVIAPWIGR 226
             GT+ A  I +  G  +S+ + L G+ T ++ P I R
Sbjct: 189 AVGTSTAMDISSKYGAYASLGLTLNGIFTALLTPTILR 226