Pairwise Alignments

Query, 256 a.a., Nif3-like dinuclear metal center hexameric protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., conserved hypothetical protein TIGR00486 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  277 bits (709), Expect = 1e-79
 Identities = 139/252 (55%), Positives = 174/252 (69%), Gaps = 2/252 (0%)

Query: 5   MNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELKADAL 64
           M   +L   L + L     KDY PNGLQVEGK E++ IVTGVTA  ALI+ AI LKADA+
Sbjct: 1   MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAI 60

Query: 65  LVHHGYFWKNEPEAIRGMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRLGICV 124
           LVHHG+FWK+EPE I GMK RRI+ L+ +D+NL+ YHLPLD HP LGNNA L ++LGI  
Sbjct: 61  LVHHGFFWKSEPEVITGMKQRRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILD 120

Query: 125 DGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNRTPLHIAPDQADKLIETVGWCTGGG 184
              +E   Q +   G    P++  E A  + +VL R PLHI   ++   I+ + WCTGG 
Sbjct: 121 AEAVEDVAQGLVWRGKLDLPMSASEFAAMLAEVLGRDPLHIG--ESSDEIQYLAWCTGGA 178

Query: 185 QDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLAENHG 244
           QDYI++AAS G+DAFISGE+SERT +SA EQ IHY++AGHHATER+GI+ALG  LA    
Sbjct: 179 QDYIDVAASLGVDAFISGEVSERTYHSAVEQGIHYYAAGHHATERFGIEALGRHLAREFN 238

Query: 245 FDVTFIDIDNPV 256
               F+DI NPV
Sbjct: 239 LVHHFVDITNPV 250