Pairwise Alignments

Query, 114 a.a., succinate dehydrogenase, hydrophobic membrane anchor protein from Vibrio cholerae E7946 ATCC 55056

Subject, 117 a.a., hypothetical succinate dehydrogenase, hydrophobic subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (315), Expect = 1e-34
 Identities = 56/114 (49%), Positives = 82/114 (71%), Gaps = 1/114 (0%)

Query: 1   MVKHVSSFGRNGVHDYLLIRASAIILVLYTIYIVSFCAFTD-ISYVAWTQFFGSTFTKVF 59
           MV + +SFGR+GVHD++L+RASA+IL  YTI++V F A +  ++Y AW   F +   KVF
Sbjct: 3   MVTNAASFGRSGVHDFILLRASAVILACYTIFMVGFIACSSPLTYDAWHGLFSALPMKVF 62

Query: 60  TMLALVSVLIHGWIGLWQVLTDYIKCSKLRAGLQLVVIAVLLGYFFSGLFVLWG 113
           T+L LV++L+H WIG+WQVLTDY+KC+ LR  LQ   +  +  Y  +G+ ++WG
Sbjct: 63  TLLTLVALLVHAWIGVWQVLTDYVKCTSLRGVLQFTFVVTVFCYLAAGIVIVWG 116