Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Succinate dehydrogenase flavoprotein subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  600 bits (1547), Expect = e-176
 Identities = 313/588 (53%), Positives = 393/588 (66%), Gaps = 11/588 (1%)

Query: 8   FDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQW 67
           +DA+V+GAGGAG+RA   + EQGL  A ++KVFPTRSHTV+AQGGI  ALGN  +D+W+W
Sbjct: 11  YDALVVGAGGAGLRATFGLVEQGLKTACITKVFPTRSHTVAAQGGIGAALGNMAEDNWKW 70

Query: 68  HMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEFG 127
           HMYDTVKG+D++GDQ+AIEYMC+    +V ELE  G+PFSR E+G IYQRPFGG  + FG
Sbjct: 71  HMYDTVKGADWLGDQDAIEYMCREAIPAVYELEHYGVPFSRTEDGRIYQRPFGGHMRNFG 130

Query: 128 GEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGCTAICMET 187
                R  AAADRTGHA+L TLYQQ+++     F E++ALDL+  +DG   G  A CME 
Sbjct: 131 EAPVQRACAAADRTGHAILQTLYQQSLRFNAEFFVEYFALDLII-EDGVCRGVIAWCMED 189

Query: 188 GEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIA 247
           G I  FK+  TVLATGG GR Y S T+AH  TGDG GM  RAG+P+QDME  QFHPTGI 
Sbjct: 190 GTIHRFKSHTTVLATGGYGRAYFSCTSAHTCTGDGNGMVARAGLPLQDMEFVQFHPTGIY 249

Query: 248 GAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRGCDGPW 307
           GAG L+TEG RGEGGYL N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG  GP 
Sbjct: 250 GAGCLITEGARGEGGYLTNSEGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGV-GPK 308

Query: 308 GPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGVPTQVSGQ 367
             HI L L+HLG +VL SRLPGI E ++ F+ VD  ++PIPV+PT HY MGG+PT   G+
Sbjct: 309 KDHINLHLEHLGPEVLHSRLPGITETAKVFSGVDATRDPIPVLPTVHYNMGGIPTNYHGE 368

Query: 368 AIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLRAQA 427
            +       +    GL A GE A VSVHGANRLG NSLLD+VVFGRA  L   E ++   
Sbjct: 369 VLNPTKADPEAIFPGLMAVGECACVSVHGANRLGTNSLLDIVVFGRAAALRAAEVVKPGI 428

Query: 428 EARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAMAEGLEEL 487
             +P  A   + +L+R  R  ++KG +    IR DLQ+ MQ + +VFR  K++AEG+  +
Sbjct: 429 AHKPLKADAADLALSRLDRLRSAKGAKLTAEIRDDLQQAMQRDAAVFRTTKSLAEGVARV 488

Query: 488 KVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYPE 547
             +   L +  L D S  FNT   E LEL+NLM  A +T   A  R ESRGAHA  D+P+
Sbjct: 489 DQVAASLADIKLVDTSMIFNTDLAEALELENLMACAQTTIHGAAARQESRGAHAHEDFPD 548

Query: 548 RDDENWLCHSIYNPETEQMSKREVNMTPVYR-------DPFPPKVRTY 588
           RDD+ W+ H++     +   K  ++  PV+        D   PK R Y
Sbjct: 549 RDDKTWMKHTL--AWLDPKGKVTLDYRPVHTFTLTDEIDYIEPKARVY 594