Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  957 bits (2475), Expect = 0.0
 Identities = 464/588 (78%), Positives = 518/588 (88%)

Query: 1   MTIPVRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNS 60
           M+IPVR FDAVVIGAGGAGMRAALQIS++G +CALLSKVFPTRSHTVSAQGGITVALGN+
Sbjct: 1   MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA 60

Query: 61  HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFG 120
           H+D W+ HMYDTVKGSD+IGDQ+AIE+MC+ GPE++IELE MGLPFSRF+NG IYQRPFG
Sbjct: 61  HEDHWEQHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFG 120

Query: 121 GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGC 180
           GQSK FGGEQAARTAAAADRTGHALLH LYQQNVKHKT +FSEWYALDLVKN+DGA++GC
Sbjct: 121 GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTEVFSEWYALDLVKNEDGAIVGC 180

Query: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
           TAI +ETGEI YFK+KAT+LATGGAGRIYASTTNAHINTGDGVGMA+RAGV MQDMEMWQ
Sbjct: 181 TAIEIETGEIVYFKSKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ 240

Query: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG 300
           FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLA RDVVARSMM EIREG
Sbjct: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG 300

Query: 301 RGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV 360
           RG DGP GPH  LKLDHLG++ LE+RLPG+CELSRTFAH+DP   PIPV+PTCHYMMGG+
Sbjct: 301 RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL 360

Query: 361 PTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG 420
           P +VSGQ I+++  G + +V GLFA GEIA VSVHGANRLGGNSLLDLVVFGRA G HLG
Sbjct: 361 PAKVSGQVIRKNEDGSESDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG 420

Query: 421 ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAM 480
           + L   A+ + A+A +I  SL R  RWE++K GEDP  IRKDLQ CMQ NFSVFR G+AM
Sbjct: 421 KALDETADPKEASADEIAKSLERLNRWESNKDGEDPAQIRKDLQLCMQLNFSVFRTGEAM 480

Query: 481 AEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH 540
           AEGLEELK IRERL NA L+D S EFNTQRIECLELDNLM TA +TA AAN+R ESRGAH
Sbjct: 481 AEGLEELKAIRERLANAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRQESRGAH 540

Query: 541 ARFDYPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY 588
           +R D+ ERDDENWLCHS+++P+TEQM+KR VNM P  R+ FPP  RTY
Sbjct: 541 SREDFLERDDENWLCHSLFDPQTEQMTKRAVNMEPKLREAFPPIKRTY 588