Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., L-aspartate oxidase (RefSeq) from Shewanella loihica PV-4

 Score =  212 bits (539), Expect = 4e-59
 Identities = 173/563 (30%), Positives = 256/563 (45%), Gaps = 67/563 (11%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQWH 68
           D +VIG+G AG+  AL ++E+     LLSK   +   T  AQGGI        +D  + H
Sbjct: 10  DVLVIGSGAAGLTLALHLAEKS-NVILLSKGPLSEGSTYYAQGGIASVF--DEEDTIESH 66

Query: 69  MYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEFGG 128
           + DT+     + D+  + +  +N   ++  L   G+ F + E     +          GG
Sbjct: 67  VTDTLIAGAGLCDEEVVTFTAENAKSAMEWLIHCGVAFDKEETADGDESKAPYHLTREGG 126

Query: 129 EQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWY-ALDLV-----KNQDGAVLGCTA 182
               R   AAD TG  +  TL ++ + H      E Y A+DL+     K     VLG   
Sbjct: 127 HSHRRILHAADATGKEVQVTLQERALSHPNIKVLERYNAIDLITTRKLKRPGNRVLGAYV 186

Query: 183 ICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFH 242
                  +   KA+   LATGG+ ++Y  T+N  I +GDG+ MA R+G  + +ME  QFH
Sbjct: 187 WNRNEEHVETVKARFVALATGGSSKVYQYTSNPDIASGDGIAMAWRSGCRVANMEFNQFH 246

Query: 243 PTGIAGA---GVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEI-R 298
           PT +  A     L+TE  RGEG YL   DG RFM  +     +LA RD+VAR++  E+ R
Sbjct: 247 PTCLYHADARNFLLTEALRGEGAYLKRPDGSRFMPDFDERG-ELAPRDIVARAIDYEMKR 305

Query: 299 EGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMG 358
            G  C       + L + H   D +    P I         +D  K+ IPV+P  HY  G
Sbjct: 306 LGVDC-------VYLDISHKPADFVIKHFPTIYRRCLELG-IDITKDAIPVVPAAHYTCG 357

Query: 359 GVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLH 418
           GV T + GQ           ++ GL+A GE+A   +HGANRL  NSLL+ +VF R     
Sbjct: 358 GVMTDLHGQ----------TDLNGLYAIGEVAYTGLHGANRLASNSLLECLVFAR----- 402

Query: 419 LGETLRAQAEARPATASDIEASLAR------TMRWENSK--GGEDPVVIR---KDLQRCM 467
                        A A DIE+ LA+         W+ SK    ++ VVI     +L+  M
Sbjct: 403 -------------AAAEDIESQLAKIPMPGTLPAWDESKVSNSDEEVVIAHNWHELRLFM 449

Query: 468 QNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTA 527
            +   + R  K +   L    ++++ ++  +     + F       LEL NL++ A    
Sbjct: 450 WDYVGIVRSDKRLERALRRCAMLQQEIQEYY-----SNFRVSN-NLLELRNLVQVAELII 503

Query: 528 VAANYRTESRGAHARFDYPERDD 550
             A  R ESRG H   D+P + +
Sbjct: 504 RCAMERKESRGLHYNIDHPNKSN 526