Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  368 bits (944), Expect = e-106
 Identities = 223/606 (36%), Positives = 332/606 (54%), Gaps = 40/606 (6%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHK---DDW 65
           D++V+GAG AG+R A+   E+GL   +LS +   RSH+ +AQGG+  +LGN+ K   DD 
Sbjct: 7   DSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNTVKGMGDDE 66

Query: 66  QWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENG-----------TI 114
             H  DTVKGSD+  DQ          P++V EL   G+P++R   G           TI
Sbjct: 67  DVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTKGPRQVVVNAEKVTI 126

Query: 115 YQRPFGG---QSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVK 171
            +         +++FGG +  RT   AD TGH+LL+ +  + +     +     AL L+ 
Sbjct: 127 EEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISLDIPVHERVEALALI- 185

Query: 172 NQDGAVL-GCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAG 230
             DG    G  A C+ TGE+  + AK+T +ATGG GRIY  +TNA I  G G  +AL  G
Sbjct: 186 -HDGKRCHGVVARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALALETG 244

Query: 231 VP-MQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVV 289
           V  + +ME  QFHPT I   G+L TEGCRG+GG L +KDG RFM  Y P  K+LA RDVV
Sbjct: 245 VATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDYEPEKKELASRDVV 304

Query: 290 ARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPV 349
           +R M   +R+G+G D P+GPH+ L +  LGR  +E+ L  + E+   F  +DP ++ IPV
Sbjct: 305 SRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHVETNLREVKEICENFLGIDPAEDWIPV 364

Query: 350 IPTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLV 409
            PT HY MGG+ T         D+ G+  +++GLF+ GE A   +HG NRLGGNSL + V
Sbjct: 365 RPTQHYSMGGIRT---------DAKGQSPQLKGLFSVGEAACWDMHGFNRLGGNSLAETV 415

Query: 410 VFGRATGLHLGE-----TLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQ 464
           V G   G ++ +     TL           + +   +   +     +G E    +++++Q
Sbjct: 416 VGGMIIGKYVADFCEENTLEIDTSLAERFVAQVRDEIDGLV---EGQGSESAYELKREMQ 472

Query: 465 RCMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAF 524
           R M +   +FR G  +++ +EEL+ +  R +N  L  K    N + +E L +  +++ A 
Sbjct: 473 RIMMDYVGIFRNGPELSKAVEELEALLIRSRNLGLKCKKRHANPELVEALRVKRMLKVAL 532

Query: 525 STAVAANYRTESRGAHARFDYPERDDENWLCHSIYNPETEQMSKREVN--MTPVYRDPFP 582
           + A  A  RTESRGAHAR DYP+R+D+ WL  ++ +  +   ++ +++     V +   P
Sbjct: 533 TVACGAEARTESRGAHAREDYPQRNDKEWLNRTLSSWPSVDATRPQLDYEQLDVMKMELP 592

Query: 583 PKVRTY 588
           P  R Y
Sbjct: 593 PGYRGY 598