Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  340 bits (872), Expect = 1e-97
 Identities = 212/571 (37%), Positives = 308/571 (53%), Gaps = 39/571 (6%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQW- 67
           D + IGAG AG R A++++  G +   LS V   RSH+V+AQGG+  ALGN+   D    
Sbjct: 7   DLLTIGAGLAGERCAIEVAGAGFSVVCLSLVPARRSHSVAAQGGMQAALGNAIMGDGDSP 66

Query: 68  --HMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQ----RPFGG 121
             H  DTVKGSD+  DQ       +  P  +  L   G+P++R   GT       +PF  
Sbjct: 67  DVHFLDTVKGSDWGADQEVARMFVEAAPIEMRRLAHWGVPWNRVVAGTHTYWKGGKPFDA 126

Query: 122 ----------QSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVK 171
                      S+ FGG    RT  A+D  GHA+L+T+  +  +   T+     A+ L+ 
Sbjct: 127 TEKAENHGLIHSRAFGGTAKWRTCYASDGAGHAVLYTMDNRAAQLGVTVHDRSEAVSLI- 185

Query: 172 NQDGAVL-GCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAG 230
             DG    G    C+ TGE+  + A+AT++A+GG GRIY ++TNA I  G G+ +AL  G
Sbjct: 186 -HDGETCHGAIVRCLRTGELRAYLARATLIASGGYGRIYRASTNAIICEGTGLSLALDTG 244

Query: 231 VP-MQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVV 289
           V  + +ME  QFHPTG     +LVTEGCRG+GG LL++D  RFM  Y P+  +LA RDVV
Sbjct: 245 VAKLGNMEAVQFHPTGTVPTDILVTEGCRGDGGTLLDRDEYRFMPDYEPDKAELASRDVV 304

Query: 290 ARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPV 349
           +R M+  +R G+G   P+G H+ L + HLG   + ++L  + E+ + F  +DP+ + IPV
Sbjct: 305 SRRMIEHMRTGKGVQSPYGEHLWLDIRHLGEQHIRTKLREVDEICQNFLGIDPLHQLIPV 364

Query: 350 IPTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLV 409
            PT HY MGGV T  +G A           ++GLF+ GE A   +HG NRLGGNSL + V
Sbjct: 365 RPTQHYSMGGVRTDKTGAA---------YGLKGLFSAGESACWDLHGFNRLGGNSLAETV 415

Query: 410 VFGRATGLHLGETLR------AQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDL 463
           V G   G ++ E L+      + A  R A A D EA +   +    + G E    +R+ +
Sbjct: 416 VAGGIVGRNIAEFLQGYDTAFSTAHVREAAARD-EARIRSIV--SGADGKESVYAVREAM 472

Query: 464 QRCMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETA 523
              ++    VFR GK +  G++ L+ + ER ++  LA      N +    + +  ++  A
Sbjct: 473 YDILERAAYVFRNGKDLTWGVQALQEVHERAQHIGLASDGVGANAELALAIRMPGMVRLA 532

Query: 524 FSTAVAANYRTESRGAHARFDYPERDDENWL 554
                 A  RTESRG+H R D+PER+D +WL
Sbjct: 533 LCVCHGALMRTESRGSHTREDFPERNDRDWL 563