Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

 Score =  294 bits (752), Expect = 7e-84
 Identities = 202/554 (36%), Positives = 295/554 (53%), Gaps = 47/554 (8%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQWH 68
           D ++IG GGA  RAA++  ++ +  A    +F     TV A+GG    L  + KD ++ H
Sbjct: 4   DVLIIGGGGAAARAAIECGQKNVVIASKG-LFGKSGCTVMAEGGYNAVL--NEKDSFEKH 60

Query: 69  MYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEFGG 128
             DT+KG  YI D+  ++ + KN P     LE+ G  F R E+    QRPFGGQS     
Sbjct: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117

Query: 129 EQAARTAAAADRTGHALLHTLYQQ-NVKHKTTIFSEWYALDLVKNQ---DGAVL----GC 180
               RT  + DRTGH ++  L +  N   +  I  +  A+ L+ ++   +G  L    G 
Sbjct: 118 ----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGA 173

Query: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
             + +  G+I    AK+T+LATGGAG+IY  T+N     GDG  +A R GV + DMEM Q
Sbjct: 174 VFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQ 233

Query: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG 300
           FHPTG+ G G+LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA+++  EI+EG
Sbjct: 234 FHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQEG 293

Query: 301 RGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV 360
           RG DG     + L + HL  +V++ +L  +    +    VD  KEP+ V PT H+ MGG+
Sbjct: 294 RGIDG----GVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFMGGI 348

Query: 361 PTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATG---L 417
                   I +D    +  + GLFACGE+A   +HGANRLGGN+L +  VFG   G   L
Sbjct: 349 -------KINEDC---ETNISGLFACGEVAG-GLHGANRLGGNALAETQVFGSIAGRNAL 397

Query: 418 HLGETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREG 477
           +  E     ++   +    IE  L  T +  NS  G +   +  +L+  M +  S+ R+ 
Sbjct: 398 NYAEEKIDISKVYDSVEKYIE-KLKNTFKGSNS--GNNVYSLIDELKNTMWDFVSISRDE 454

Query: 478 KAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESR 537
             +   LE+   I E      L +   +F+ +    LEL+N++  +     +A  R ESR
Sbjct: 455 NGLKTALEK---INEIAGKKVLINGVVDFSKK----LELENMVLVSKIVINSALLRKESR 507

Query: 538 GAHARFDYPERDDE 551
           GAH R DYP+ ++E
Sbjct: 508 GAHFRNDYPKTNEE 521