Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  970 bits (2508), Expect = 0.0
 Identities = 471/588 (80%), Positives = 523/588 (88%)

Query: 1   MTIPVRSFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNS 60
           M+IPVR FDAVVIGAGGAGMRAALQIS++G +CALLSKVFPTRSHTVSAQGGITVALGN+
Sbjct: 1   MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA 60

Query: 61  HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFG 120
           H+D W+ HMYDTVKGSD+IGDQ+AIE+MC+ GPE++IELE MGLPFSRF+NG IYQRPFG
Sbjct: 61  HEDHWEQHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFG 120

Query: 121 GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGC 180
           GQSK FGGEQAARTAAAADRTGHALLH LYQQNVKHKT +FSEWYALDLVKNQDGA++GC
Sbjct: 121 GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNQDGAIVGC 180

Query: 181 TAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ 240
           TAI +ETGEI YFKAKATVLATGGAGRIYASTTNAHINTGDGVGMA+RAGV MQDMEMWQ
Sbjct: 181 TAIEIETGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ 240

Query: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG 300
           FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLA RDVVARSMM EIREG
Sbjct: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG 300

Query: 301 RGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV 360
           RG DGP GPH  LKLDHLG++ LE+RLPG+CELSRTFAH+DP   PIPV+PTCHYMMGG+
Sbjct: 301 RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL 360

Query: 361 PTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG 420
           PT+VSGQ I++++ G + +V GLFA GEIA VSVHGANRLGGNSLLDLVVFGRA G HLG
Sbjct: 361 PTKVSGQVIRKNTDGTEQDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG 420

Query: 421 ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAM 480
           + L   A+ + AT +DI+ASLAR  RWE++K GEDPV IRKDLQ CMQ NFSVFR G AM
Sbjct: 421 KALDETADPKDATDADIQASLARLQRWESNKDGEDPVQIRKDLQLCMQLNFSVFRRGDAM 480

Query: 481 AEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH 540
           AEGLE+LK IR+RL+NA L+D S EFNTQRIECLELDNLM TA +TA AAN+RTESRGAH
Sbjct: 481 AEGLEQLKAIRKRLENAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH 540

Query: 541 ARFDYPERDDENWLCHSIYNPETEQMSKREVNMTPVYRDPFPPKVRTY 588
           +R DY ERDDENWLCHS+++P TE M +R VNM P  R+ FPPK RTY
Sbjct: 541 SREDYLERDDENWLCHSLFDPVTETMDRRAVNMAPKLREAFPPKKRTY 588