Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., fumarate reductase flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  364 bits (935), Expect = e-105
 Identities = 222/605 (36%), Positives = 330/605 (54%), Gaps = 38/605 (6%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHK---DDW 65
           D++V+GAG AG+R A+   E+GL   +LS +   RSH+ +AQGG+  +LGN+ K   DD 
Sbjct: 7   DSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGDDE 66

Query: 66  QWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENG-----------TI 114
             H  DTVKGSD+  DQ          P++V EL   G+P+SR   G           T+
Sbjct: 67  DVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVIVNAQKVTL 126

Query: 115 YQRPFGG---QSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVK 171
            +         +++FGG +  RT   AD TGH+LL+ +  + +     +     AL L+ 
Sbjct: 127 QEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMDIPVHERVEALALIH 186

Query: 172 NQDGAVLGCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGV 231
           + +    G  A C+ +GE+  + AK+T +ATGG GRIY  +TNA I  G G  +AL  GV
Sbjct: 187 DGERCH-GVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALALETGV 245

Query: 232 P-MQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVA 290
             + +ME  QFHPT I   G+L TEGCRG+GG L +KDG RFM  Y P  K+LA RDVV+
Sbjct: 246 ATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVS 305

Query: 291 RSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVI 350
           R M   +R+G+G D P+GPH+ L +  LGR  +E+ L  + E+   F  +DP K+ IPV 
Sbjct: 306 RRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGIDPAKDWIPVR 365

Query: 351 PTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVV 410
           PT HY MGG+ T+ +G++          +++GLF+ GE A   +HG NRLGGNSL + VV
Sbjct: 366 PTQHYSMGGIRTKATGES---------PQLKGLFSVGEAACWDMHGFNRLGGNSLAETVV 416

Query: 411 FGRATGLHLGETLRAQAEARPATASDIEASLARTMRWE-----NSKGGEDPVVIRKDLQR 465
            G   G ++ +     +     T ++      R ++ E     +  G E P  ++  +QR
Sbjct: 417 GGMIIGKYIADFCENNSLEINTTLAE---QFMRQVQTEIDTLVDGDGHESPFELKHAMQR 473

Query: 466 CMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFS 525
            M +   +FR G  + + + ELK + ER +   +  K    N + +E L +  +++ A +
Sbjct: 474 IMMDYVGIFRNGPELDKAVTELKALLERSRKLGIKCKKRHANPELVEALRVKRMLKVALT 533

Query: 526 TAVAANYRTESRGAHARFDYPERDDENWLCHSIYNPETEQMSKREVNMTP--VYRDPFPP 583
            A  A  RTESRGAHAR DYP+R+D +WL  ++ +       +  ++  P  V +   PP
Sbjct: 534 VACGAAARTESRGAHAREDYPQRNDRDWLNRTLASWPDANALEPVLSYEPLDVMKMELPP 593

Query: 584 KVRTY 588
             R Y
Sbjct: 594 GYRGY 598