Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., succinate dehydrogenase, flavoprotein subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  587 bits (1513), Expect = e-172
 Identities = 302/572 (52%), Positives = 386/572 (67%), Gaps = 3/572 (0%)

Query: 7   SFDAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDDWQ 66
           ++D VV+GAGGAG+RA L ++EQGL  A +SKVFPTRSHTV+AQGGI  +L N   D WQ
Sbjct: 10  NYDVVVVGAGGAGLRATLGMAEQGLRTACISKVFPTRSHTVAAQGGIAASLSNMGPDHWQ 69

Query: 67  WHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENGTIYQRPFGGQSKEF 126
           WHMYDTVKGSD++GD +A+EY+ +  P++V ELE  G+PFSR E G IYQRPFGG + EF
Sbjct: 70  WHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHTTEF 129

Query: 127 G-GEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAVLGCTAICM 185
           G G    RT AAADRTGHA+LHTLY Q++K+    F E++A+DL+ ++DG   G     +
Sbjct: 130 GEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFFIEYFAIDLIMSEDGQCQGVVCWKL 189

Query: 186 ETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTG 245
           + G I  F AK TVLATGG GR Y S T+AH  TGDG GM  R G+P+QDME  QFHPTG
Sbjct: 190 DDGTIHVFNAKMTVLATGGYGRAYFSATSAHTCTGDGGGMVARQGLPLQDMEFVQFHPTG 249

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRGCDG 305
           I GAG L+TEG RGEGGYL N +GERFMERYAP  KDLA RDVV+R M +EIREGRG  G
Sbjct: 250 IYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTMEIREGRGV-G 308

Query: 306 PWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGVPTQVS 365
           P G HI L L+HL  + L  RLPGI E +R FA VD  KEPIPV+PT HY MGG+PT   
Sbjct: 309 PDGDHIHLHLNHLPPETLALRLPGISESARIFAGVDVNKEPIPVLPTVHYNMGGIPTNYW 368

Query: 366 GQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLRA 425
           G+ +   +   D    GL A GE    SVHGANRLG NSL+DLVVFGRA  +  G+ +  
Sbjct: 369 GEVLNPTAEDPDRIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIKAGQVVDP 428

Query: 426 QAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQRCMQNNFSVFREGKAMAEGLE 485
                    + I+A+LAR     ++KG      +R ++Q+ MQ + +VFR  K +AEG++
Sbjct: 429 TVSNPTLNQASIDAALARFDGLRHAKGNVSTAELRLEMQKTMQADAAVFRTDKTLAEGVQ 488

Query: 486 ELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDY 545
           ++  +  ++ +  + D+S  +N+  +E LEL NLM  A +T V+A  R ESRGAHA  DY
Sbjct: 489 KMYGVAGKVDDIKVTDRSLVWNSDLMETLELTNLMPNALATIVSAEARKESRGAHAHEDY 548

Query: 546 PERDDENWLCHSI-YNPETEQMSKREVNMTPV 576
            +RDDENW  H++ Y      +  R V++ P+
Sbjct: 549 ADRDDENWRKHTLAYVNGKVDLDYRPVHLNPL 580