Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  367 bits (943), Expect = e-106
 Identities = 222/606 (36%), Positives = 333/606 (54%), Gaps = 40/606 (6%)

Query: 9   DAVVIGAGGAGMRAALQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHK---DDW 65
           D++V+GAG AG+R A+   E+GL   +LS +   RSH+ +AQGG+  +LGN+ K   DD 
Sbjct: 7   DSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVKGMGDDE 66

Query: 66  QWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELERMGLPFSRFENG-----------TI 114
             H  DTVKGSD+  DQ          P++V EL   G+P++R   G           T+
Sbjct: 67  DVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTAGPRDVIVNAQKVTL 126

Query: 115 YQRPFGG---QSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVK 171
            +         +++FGG +  RT   AD TGH+LL+ +  + +     +     AL ++ 
Sbjct: 127 QEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMDIPVHERVEALSII- 185

Query: 172 NQDGAVL-GCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAG 230
             DG    G  A C+ TGE+  + AK+T +ATGG GRIY  +TNA I  G G  +AL  G
Sbjct: 186 -HDGQRCHGVIARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALALETG 244

Query: 231 VP-MQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVV 289
           V  + +ME  QFHPT I   G+L TEGCRG+GG L +KDG RFM  Y P  K+LA RDVV
Sbjct: 245 VATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVV 304

Query: 290 ARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPIPV 349
           +R M   +R+G+G D P+GPH+ L +  LGR  +E+ L  + E+   F  +DP K+ IPV
Sbjct: 305 SRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGIDPAKDWIPV 364

Query: 350 IPTCHYMMGGVPTQVSGQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLLDLV 409
            PT HY MGG+ T+ +G++          +++GLF+ GE A   +HG NRLGGNSL + V
Sbjct: 365 RPTQHYSMGGIRTKATGES---------PQLKGLFSVGEAACWDMHGFNRLGGNSLAETV 415

Query: 410 VFGRATGLHLGE-----TLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQ 464
           V G   G ++ +     +L    +        ++  +   +   + +G E P  +++++Q
Sbjct: 416 VGGMIIGKYVADFCENNSLEIDTQLAEKFMRQVQTEIDTLV---DGEGHESPFELKREMQ 472

Query: 465 RCMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAF 524
           R M +   +FR G  + + + ELK + ER +   +  K    N + +E L +  +++ A 
Sbjct: 473 RIMMDYVGIFRNGPELDKAVTELKALLERSRKLGVKCKKRHANPELVEALRVKRMLKVAL 532

Query: 525 STAVAANYRTESRGAHARFDYPERDDENWLCHSIYN-PETEQMSK-REVNMTPVYRDPFP 582
           + A  A  RTESRGAHAR DYP+R+D +WL  ++ + P+ E ++         V +   P
Sbjct: 533 TVACGAAARTESRGAHAREDYPQRNDRDWLNRTLASWPDAEALAPVLSYEPLDVMKMELP 592

Query: 583 PKVRTY 588
           P  R Y
Sbjct: 593 PGYRGY 598