Pairwise Alignments

Query, 236 a.a., succinate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., fumarate reductase iron-sulfur subunit (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (291), Expect = 3e-31
 Identities = 80/232 (34%), Positives = 122/232 (52%), Gaps = 9/232 (3%)

Query: 3   LNFSLYRYNPDV-DNKPYMKDYILEVEEGSDMMVLDALILLKEQ-DPSIAFRRSCREGVC 60
           L F+++RY+P + D+KP M  Y  ++EE   M V  AL +L+EQ DPS+ F   CR G+C
Sbjct: 7   LTFNIFRYDPQMPDDKPKMVKY--QLEEAPGMTVFIALNMLREQQDPSLQFDFVCRAGIC 64

Query: 61  GSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYA-KVKPFL 119
           GS  + +NG   LAC T  S      I + PLPG  ++ DL V+  +F    A ++K +L
Sbjct: 65  GSCAMVINGYPTLACRTLTSKYPKGDITLMPLPGFELIGDLSVNTGKFMRELAERLKLWL 124

Query: 120 IA--DDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAY 177
               D+A     E    PEE A L  L  C+ C  C ++C +     D F+G  G++   
Sbjct: 125 HPRNDEADIHRIEAPMDPEEAAKLYELERCVECGVCVSACATKQMR-DTFVGAVGMMKIA 183

Query: 178 RWLIDSRDTATDERLSN-LDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIK 228
           R+ +DSRD  + E   + + +   VF C  ++ C   CPK L   + I +++
Sbjct: 184 RFELDSRDARSVEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLR 235