Pairwise Alignments

Query, 236 a.a., succinate dehydrogenase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis JJ

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 23/196 (11%)

Query: 33  MMVLDALILL-KEQDPSIAFRRSCREGVCGSDGLNMNGKNGLACITPLSALKGDKIVIRP 91
           + VLDAL  + K    +I FR SC+ G CGS  + +N K+ LAC T +     D ++I P
Sbjct: 23  LTVLDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVE----DNMIIEP 78

Query: 92  LPGLPVVRDLIVDMTQFYD------NYAKVKPFLIADDALPPSRENLQSPEERAHLDGLY 145
           L G  V+ DL+VD   +Y       NY + K   I +  L   +     P++   +  + 
Sbjct: 79  LEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKITEKELDGLK---LYPDDLKDVKKIR 135

Query: 146 ECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDSRDTATDERLSNLDDAF--SVFR 203
            CI C  C   CP+  ++   + GP  +    R+  D +D    E+     +AF  +++ 
Sbjct: 136 GCIDCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKDEIDREK-----EAFDENIYN 188

Query: 204 CHGIMNCVSVCPKGLN 219
           C     CV VCPK ++
Sbjct: 189 CTTCGRCVEVCPKEID 204